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Publications

  • Yong, M., Chen, Y., Oo, G., Chang, K.C., Chu, W.H., Teo, J., Venkatachalam, I., Thevasagayam, N.M., Sridatta, P.S.R., Koh, V. and Marcoleta, A.E., 2022. Dominant Carbapenemase-Encoding Plasmids in Clinical Enterobacterales Isolates and Hypervirulent Klebsiella pneumoniae, Singapore. Emerging Infectious Diseases, 28(8), p.1578.
     

  • Marimuthu, Kalisvar, Indumathi Venkatachalam, Vanessa Koh, Stephan Harbarth, Eli Perencevich, Benjamin Pei Zhi Cherng, Raymond Kok Choon Fong, Prakki Sai Rama Sridatta et al. "Whole genome sequencing reveals hidden transmission of carbapenemase-producing Enterobacterales." Nature communications 13, no. 1 (2022): 3052.
     

  • Ong, Sean Wei Xiang, Pooja Rao, Wei Xin Khong, Victor Yi Fa Ong, Prakki Sai Rama Sridatta, Natascha May Thevasagayam, Benjamin Choon Heng Ho et al. "Genomic surveillance uncovers ongoing transmission of carbapenem-resistant Acinetobacter baumannii (CRAB) and identifies actionable routes of transmissions in an endemic setting." Infection Control & Hospital Epidemiology (2022): 1-7.

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  • Sridatta, Prakki Sai Rama, et al.“CPgeneProfiler: A lightweight R package to profile the Carbapenamase genes from genome assemblies.” Journal of Open Source Software 5.54 (2020): 2473.
     

  • Chen, Yahua, Kalisvar Marimuthu, Jeanette Teo, Indumathi Venkatachalam, Benjamin Pei Zhi Cherng, Liang De Wang, Sai Rama Sridatta Prakki et al. “Acquisition of Plasmid with Carbapenem-Resistance Gene blaKPC2 in Hypervirulent Klebsiella pneumoniae, Singapore.” Emerging infectious diseases 26, no. 3 (2020): 549.
     

  • Octavia, Sophie, Marimuthu Kalisvar, Indumathi Venkatachalam, Oon Tek Ng, Weizhen Xu, Prakki Sai Rama Sridatta, Yi Fa Ong et al. “Klebsiella pneumoniae and Klebsiella quasipneumoniae define the population structure of bla KPC-2 Klebsiella: a 5 year retrospective genomic study in Singapore.” Journal of Antimicrobial Chemotherapy 74, no. 11 (2019): 3205-3210.
     

  • Komissarov A, Vij S, Yurchenko A, Trifonov V, Thevasagayam N, Saju J, Sridatta P, Purushothaman K, Graphodatsky A, Orban L, Kuznetsova I.B chromosomes of the Asian seabass (Lates calcarifer) contribute to genome variations at the level of individuals and populations. Genes. 2018 Sep 20;9(10):464.
     

  • Shen X, Ngoh SY, Thevasagayam NM, Prakki SR, Bhandare P, Tan AW, Tan GQ, Singh S, Phua NC, Vij S, Orban L. BAC-pool sequencing and analysis confirms growth-associated QTLs in the Asian seabass genome. Scientific reports. 2016 Nov 8;6:36647.
     

  • Vij S, Kuhl H, Kuznetsova IS, Komissarov A, Yurchenko AA, Van Heusden P, Singh S, Thevasagayam NM, Prakki SR, Purushothaman K, Saju JM. Chromosomal-level assembly of the Asian seabass genome using long sequence reads and multi-layered scaffolding. PLoS genetics. 2016 Apr 15;12(4):e1005954.
     

  • Ngoh SY, Tan D, Shen X, Kathiresan P, Jiang J, Liew WC, Thevasagayam NM, Kwan HY, Saju JM, Prakki SR, Goh CH. Nutrigenomic and nutritional analyses reveal the effects of pelleted feeds on Asian seabass (Lates calcarifer). PloS one. 2015 Dec 22;10(12):e0145456.
     

  • Thevasagayam NM, Sridatta PS, Jiang J, Tong A, Saju JM, Kathiresan P, Kwan HY, Ngoh SY, Liew WC, Kuznetsova IS, Shen X. Transcriptome survey of a marine food fish: Asian seabass (Lates calcarifer). Journal of Marine Science and Engineering. 2015 Jun 2;3(2):382-400.
     

  • Kuznetsova IS, Thevasagayam NM, Sridatta PS, Komissarov AS, Saju JM, Ngoh SY, Jiang J, Shen X, Orban L. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Frontiers in genetics. 2014 Jul 25;5:223.
     

  • Shen XY, Kwan HY, Thevasagayam NM, Prakki SR, Kuznetsova IS, Ngoh SY, Lim Z, Feng F, Chang A, Orban L. The first transcriptome and genetic linkage map for Asian arowana. Molecular ecology resources. 2014 May;14(3):622-35.

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